This bibliography accompanies

Applications of Parallel I/O

David Kotz

Dartmouth College
Department of Computer Science
Technical Report PCS-TR96-297
Release 1
October 14, 1996

[Are91]
James W. Arendt. Parallel genome sequence comparison using a concurrent file system. Technical Report UIUCDCS-R-91-1674, University of Illinois at Urbana-Champaign, 1991.
[AUB+96]
Anurag Acharya, Mustafa Uysal, Robert Bennett, Assaf Mendelson, Michael Beynon, Jeffrey K. Hollingsworth, Joel Saltz, and Alan Sussman. Tuning the performance of I/O intensive parallel applications. In Fourth Workshop on Input/Output in Parallel and Distributed Systems, pages 15-27, Philadelphia, May 1996.
[BC93]
P. E. Bjorstad and J. Cook. Large scale structural analysis on massively parallel computers. In Linear Algebra for Large Scale and Real-Time Applications, pages 3-11. Kluwer Academic Publishers, 1993.
[Bel88]
Jean L. Bell. A specialized data management system for parallel execution of particle physics codes. In Proceedings of the ACM SIGMOD International Conference on Management of Data, pages 277-285, 1988.
[BW96]
Sandra Johnson Baylor and C. Eric Wu. Parallel I/O workload characteristics using Vesta. In Ravi Jain, John Werth, and James~C. Browne, editors, Input/Output in Parallel and Distributed Computer Systems, volume 362 of The Kluwer International Series in Engineering and Computer Science, chapter~7, pages 167-185. Kluwer Academic Publishers, 1996.
[CACR95]
Phyllis E. Crandall, Ruth A. Aydt, Andrew A. Chien, and Daniel A. Reed. Input/output characteristics of scalable parallel applications. In Proceedings of Supercomputing '95, December 1995.
[CHKM93]
R. Cypher, A. Ho, S. Konstantinidou, and P. Messina. Architectural requirements of parallel scientific applications with explicit communication. In Proceedings of the 20th Annual International Symposium on Computer Architecture, pages 2-13, 1993.
[CSWM95]
Terry W. Clark, L. Ridgway Scott, Stanislaw Wlodek, and J. Andrew McCammon. I/O limitations in parallel molecular dynamics. In Proceedings of Supercomputing '95, 1995.
[dC94]
Juan Miguel del Rosario and Alok Choudhary. High performance I/O for parallel computers: Problems and prospects. IEEE Computer, 27(3):59-68, March 1994.
[Die90]
Carl Diegert. Out-of-core backpropagation. In International Joint Conference on Neural Networks, volume~2, pages 97-103, 1990.
[FAJL+95]
Hassan Fallah-Adl, Joseph JaJa, Shunlin Liang, Yoram J. Kaufman, and John Townshend. Efficient algorithms for atmospheric correction of remotely sensed data. In Proceedings of Supercomputing '95, 1995.
[GGL93]
N. Galbreath, W. Gropp, and D. Levine. Applications-driven parallel I/O. In Proceedings of Supercomputing '93, pages 462-471, 1993.
[HLDS95]
Steven W. Hammond, Richard D. Loft, John M. Dennis, and Rochard K. Sato. Implementation and performance issues of a massively parallel atmospheric model. Parallel Computing, 21:1593-1619, 1995.
[HRW+95]
James J. Hack, James M. Rosinski, David L. Williamson, Byron A. Boville, and John E. Truesdale. Computational design of the NCAR community climate model. Parallel Computing, 21:1545-1569, 1995.
[JKH95]
Philip W. Jones, Christopher L. Kerr, and Richard S. Hemler. Practical considerations in development of a parallel SKYHI general circulation model. Parallel Computing, 21:1677-1694, 1995.
[Joh84]
Olin G. Johnson. Three-dimensional wave equation computations on vector computers. Proceedings of the IEEE, 72(1):90-95, January 1984.
[KFG94]
John F. Karpovich, James C. French, and Andrew S. Grimshaw. High performance access to radio astronomy data: A case study. In Proceedings of the 7th International Working Conference on Scientific and Statistical Database Management, September 1994. Also available as Univ. of Virginia TR CS-94-25.
[KGF93]
John F. Karpovich, Andrew S. Grimshaw, and James C. French. Breaking the I/O bottleneck at the National Radio Astronomy Observatory (NRAO). Technical Report CS-94-37, University of Virginia, August 1993.
[KN94a]
David Kotz and Nils Nieuwejaar. Dynamic file-access characteristics of a production parallel scientific workload. In Proceedings of Supercomputing '94, pages 640-649, November 1994.
[KN94b]
David Kotz and Nils Nieuwejaar. Dynamic file-access characteristics of a production parallel scientific workload. Technical Report PCS-TR94-211, Dept. of Math and Computer Science, Dartmouth College, April 1994. Revised May 11, 1994.
[KN95]
David Kotz and Nils Nieuwejaar. File-system workload on a scientific multiprocessor. IEEE Parallel and Distributed Technology, pages 51-60, Spring 1995.
[Kot96]
David Kotz. BibTeX bibliography file: Parallel I/O. May 1996. Eighth Edition.
[Moo95]
Jason A. Moore. Parallel I/O requirements of four oceanography applications. Technical Report 95-80-1, Oregon State University, January 1995.
[MPP+95]
Craig Miller, David G. Payne, Thanh N. Phung, Herb Siegel, and Roy Williams. Parallel processing of spaceborne imaging radar data. In Proceedings of Supercomputing '95, 1995.
[NKP+95]
Nils Nieuwejaar, David Kotz, Apratim Purakayastha, Carla Schlatter Ellis, and Michael Best. File-access characteristics of parallel scientific workloads. Technical Report PCS-TR95-263, Dept. of Computer Science, Dartmouth College, August 1995. To appear in IEEE TPDS.
[NKP+96]
Nils Nieuwejaar, David Kotz, Apratim Purakayastha, Carla Schlatter Ellis, and Michael Best. File-access characteristics of parallel scientific workloads. IEEE Transactions on Parallel and Distributed Systems, 7(10):1075-1089, October 1996.
[OOVW96]
Curtis Ober, Ron Oldfield, John VanDyke, and David Womble. Seismic imaging on massively parallel computers. Technical Report SAND96-1112, Sandia National Laboratories, April 1996.
[PEK+94]
Apratim Purakayastha, Carla Schlatter Ellis, David Kotz, Nils Nieuwejaar, and Michael Best. Characterizing parallel file-access patterns on a large-scale multiprocessor. Technical Report CS-1994-33, Dept. of Computer Science, Duke University, October 1994.
[PEK+95]
Apratim Purakayastha, Carla Schlatter Ellis, David Kotz, Nils Nieuwejaar, and Michael Best. Characterizing parallel file-access patterns on a large-scale multiprocessor. In Proceedings of the Ninth International Parallel Processing Symposium, pages 165-172, April 1995.
[Poo94]
James T. Poole. Preliminary survey of I/O intensive applications. Technical Report CCSF-38, Scalable I/O Initiative, Caltech Concurrent Supercomputing Facilities, Caltech, 1994.
[RB90]
A. L. Narasimha Reddy and Prithviraj Banerjee. A study of I/O behavior of Perfect benchmarks on a multiprocessor. In Proceedings of the 17th Annual International Symposium on Computer Architecture, pages 312-321, 1990.
[RHH95]
Bernardo Rodriguez, Leslie Hart, and Tom Henderson. Programming regular grid-based weather simulation models for portable and fast execution. In Proceedings of the 1995 International Conference on Parallel Processing, pages III:51-59, August 1995.
[RW93]
J. S. Ryan and S. K. Weeratunga. Parallel computation of 3-D Navier-Stokes flowfields for supersonic vehicles. In 31st Aerospace Sciences Meeting and Exhibit, Reno, NV, 1993. AIAA Paper 93-0064.
[Rya91]
Steve Ryan. CFS workload demonstration code. WWW ftp://ftp.cs.dartmouth.edu/pub/pario/examples/CFS3D.tar.Z, July 1991. A simple program demonstrating CFS usage for ARC3D-like applications.
[SACR96]
Evgenia Smirni, Ruth A. Aydt, Andrew A. Chien, and Daniel A. Reed. I/O requirements of scientific applications: An evolutionary view. In Proceedings of the Fifth IEEE International Symposium on High Performance Distributed Computing, pages 49-59, 1996.
[TGL96a]
Rajeev Thakur, William Gropp, and Ewing Lusk. An experimental evaluation of the parallel I/O systems of the IBM SP and Intel Paragon using a production application. In Proceedings of the Third International Conference of the Austrian Center for Parallel Computation (ACPC), volume 1127 of Lecture Notes in Computer Science, pages 24-35. Springer-Verlag, September 1996.
[TGL96b]
Rajeev Thakur, William Gropp, and Ewing Lusk. An experimental evaluation of the parallel I/O systems of the IBM SP and Intel Paragon using a production application. Technical Report MCS-P569-0296, Argonne National Laboratory, February 1996.
[TLG95]
Rajeev Thakur, Ewing Lusk, and William Gropp. I/O characterization of a portable astrophysics application on the IBM SP and Intel Paragon. Technical Report MCS-P534-0895, Argonne National Laboratory, August 1995. Revised October 1995.
[Woo93]
Paul R. Woodward. Interactive scientific visualization of fluid flow. IEEE Computer, 26(10):13-25, October 1993.