This collection contains works by faculty from the Dartmouth Department of Computer Science.

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Submissions from 2023

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Structural Files for the ETR1 Ethylene-Receptor Dimer Based on Computational Modeling, Beenish J. Azhar, Safdar Abbas, Sitwat Aman, Maria V. Yamburenko, Wei Chen, Lena Muller, Buket Uzun, David A. Jewell, Jian Dong, Samina N. Shakeel, Georg Groth, Brad M. Binder, Gevorg Grigoryan, and G. Eric Schaller

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Interpretable Learning in Multivariate Big Data Analysis for Network Monitoring, José Camacho, Rasmus Bro, and David Kotz

Submissions from 2022

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Eating detection with a head-mounted video camera, Shengjie Bi and David Kotz

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A Smartwatch Step-Counting App for Older Adults: Development and Evaluation Study, George Boateng, Curtis L. Petersen, David Kotz, Karen L. Fortuna, Rebecca Masutani, and John A. Batsis

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Amanuensis: provenance, privacy, and permission in TEE-enabled blockchain data systems, Taylor Hardin and David Kotz

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Evaluating Voice-Assistant Commands for Dementia Detection, Xiaohui Liang, John A. Batsis, Youxiang Zhu, Tiffany M. Driesse, Robert M. Roth, David Kotz, and Brian MacWhinney

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The Feasibility and Utility of Harnessing Digital Health to Understand Clinical Trajectories in Medication Treatment for Opioid Use Disorder: D-TECT Study Design and Methodological Considerations, Lisa A. Marsch, Ching-Hua Chen, Sara R. Adams, Asma Asyyed, Monique B. Does, Saeed Hassanpour, Emily Hichborn, Melanie Jackson-Morris, Nicholas C. Jacobson, Heather K. Jones, David Kotz, Chantal A. Lambert-Harris, Zhiguo Li, Bethany McLeman, Varun Mishra, Catherine Stanger, Geetha Subramaniam, Weiyi Wu, and Cynthia I. Campbell

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Harmonic response vs. target orientation: a preliminary study of the effect of polarization on nonlinear junction detection, Gregory Mazzaro, Kyle Gallagher, Kelly Sherbondy, Alex Bouvy, Beatrice Perez, Timothy Pierson, and David Kotz

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Analog Gated Recurrent Neural Network for Detecting Chewing Events, Kofi Odame, Maria Nyamukuru, Mohsen Shahghasemi, Shengjie Bi, and David Kotz

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Detecting the Presence of Electronic Devices in Smart Homes Using Harmonic Radar, Beatrice Perez, Gregory Mazzaro, Timothy J. Pierson, and David Kotz

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Privacy Concerns of Older Adults Using Voice Assistant Systems, Hillary B. Spangler, Tiffany M. Driesse, David H. Lynch, Xiaohui Liang, Robert M. Roth, David Kotz, Karen L. Fortuna, and John A. Batsis

Submissions from 2021

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An audio personal health library of clinic visit recordings for patients and their caregivers (HealthPAL): User-centered design approach, Paul J. Barr, William Haslett, Michelle D. Dannenberg, Lisa Oh, Glyn Elwyn, Saeed Hassanpour, Kyra L. Bonasia, James C. Finora, Jesse A. Schoonmaker, W. Moraa Onsando, James Ryan, Martha L. Bruce, Amar K. Das, Roger Arend, Sheryl Piper, and Craig H. Ganoe

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A Weight-Loss Intervention Augmented by a Wearable Device in Rural Older Adults with Obesity: A Feasibility Study, John A. Batsis, Curtis L. Petersen, Matthew L. Clark, Summer B. Cook, Francisco Lopez-Jimenez, Rima I. Al-Nimer, Dawna Pidgeon, David Kotz, Todd A. Mackenzie, and Stephen J. Bartels

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Feasibility and acceptability of a technology-based, rural weight management int ervention in older adults with obesity, John A. Batsis, Curtis L. Petersen, Matthew M. Clark, Summer B. Cook, David Kotz, Tyler L. Gooding, Meredith N. Roderka, Rima I. Al-Nimer, Dawna M. Pidgeon, Ann Haedrich, K. C. Wright, Christina Aquila, and Todd A. Mackenzie

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A smartphone intervention for people with serious mental illness: Fully remote randomized controlled trial of CORE, Dror Ben-Zeev, Ayesha Chander, Justin Tauscher, Benjamin Buck, Subigya Nepal, Andrew Campbell, and Guy Doron

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Diverse antiviral IgG effector activities are predicted by unique biophysical antibody features, Hao D. Cheng, Karen G. Dowell, Chris Bailey-Kellogg, Brittany A. Goods, J. Christopher Love, Guido Ferrari, Galit Alter, Johannes Gach, Donald N. Forthal, George K. Lewis, Kelli Greene, Hongmei Gao, David C. Montefiori, and Margaret E. Ackerman

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Understanding the timing of Chinese border incursions into India, Kevin T. Greene, Caroline Tornquist, Robbert Fokkink, Roy Lindelauf, and V. S. Subrahmanian

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Amanuensis: Information Provenance for Health-Data Systems, Taylor Hardin and David Kotz

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Predicting prognosis and IDH mutation status for patients with lower-grade gliomas using whole slide images, Shuai Jiang, George J. Zanazzi, and Saeed Hassanpour

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When Do Drivers Interact with In-vehicle Well-being Interventions? An Exploratory Analysis of a Longitudinal Study on Public Roads, Kevin Koch, Varun Mishra, Shu Liu, Thomas Berger, Elgar Fleisch, David Kotz, and Felix Wortmann

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VibeRing: Using vibrations from a smart ring as an out-of-b and channel for sharing secret keys, David Kotz

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Using impression data to improve models of online social influence, Rui Liu, Kevin T. Greene, Ruibo Liu, Mihovil Mandic, Benjamin A. Valentino, Soroush Vosoughi, and V. S. Subrahmanian

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Mining social interactions in connection traces of a campus Wi-Fi network, Eduardo Antonio Mañas-Martínez, Elena Cabrera, Katarzyna Wasielewska, David Kotz, and José Camacho

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Comprehensive analysis of lectin-glycan interactions reveals determinants of lectin specificity, Daniel E. Mattox and Chris Bailey-Kellogg

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Detecting Receptivity for mHealth Interventions in the Natural Environment, Varun Mishra, Florian Künzler, Jan-Niklas Kramer, Elgar Fleisch, Tobias Kowatsch, and David Kotz

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Evaluation of an Artificial Intelligence-Augmented Digital System for Histologic Classification of Colorectal Polyps, Mustafa Nasir-Moin, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Douglas J. Robertson, Srishti Bagchi, Naofumi Tomita, Jason W. Wei, Todd A. Mackenzie, Judy R. Rees, and Saeed Hassanpour

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The “Narratives” fMRI dataset for evaluating models of naturalistic language comprehension, Samuel A. Nastase, Yun Fei Liu, Hanna Hillman, Asieh Zadbood, Liat Hasenfratz, Neggin Keshavarzian, Janice Chen, Christopher J. Honey, Yaara Yeshurun, Mor Regev, Mai Nguyen, Claire H.C. Chang, Christopher Baldassano, Olga Lositsky, Erez Simony, Michael A. Chow, Yuan Chang Leong, Paula P. Brooks, Emily Micciche, and Gina Choe

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Corrigendum: Elena+ Care for COVID-19, a Pandemic Lifestyle Care Intervention: Intervention Design and Study Protocol (Front. Public Health, (2021), 9, (625640), 10.3389/fpubh.2021.625640), Joseph Ollier, Simon Neff, Christine Dworschak, Arber Sejdiji, Prabhakaran Santhanam, Roman Keller, Grace Xiao, Alina Asisof, Dominik Rüegger, Caterina Bérubé, Lena Hilfiker Tomas, Joël Neff, Jiali Yao, Aishah Alattas, Veronica Varela-Mato, Amanda Pitkethly, Mª Dolores Vara, Rocío Herrero, Rosa Mª Baños, and Carolina Parada

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Elena+ Care for COVID-19, a Pandemic Lifestyle Care Intervention: Intervention Design and Study Protocol, Joseph Ollier, Simon Neff, Christine Dworschak, Arber Sejdiji, Prabhakaran Santhanam, Roman Keller, Grace Xiao, Alina Asisof, Dominik Rüegger, Caterina Bérubé, Lena Hilfiker Tomas, Joël Neff, Jiali Yao, Aishah Alattas, Veronica Varela-Mato, Amanda Pitkethly, Mª Dolores Vara, Rocío Herrero, Rosa Mª Baños, and Carolina Parada

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Recurring Verification of Interaction Authenticity Within Bluetooth Networks, Travis Peters, Timothy J. Pierson, Sougata Sen, José Camacho, and David Kotz

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Usability Assessment of a Bluetooth-Enabled Resistance Exercise Band Among Young Adults, Lillian M. Seo, Curtis L. Peterson, Ryan J. Halter, David Kotz, Karen L. Fortuna, and John A. Batsis

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Structural analysis of cross α-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials, Fengbin Wang, Ordy Gnewou, Charles Modlin, Leticia C. Beltran, Chunfu Xu, Zhangli Su, Puneet Juneja, Gevorg Grigoryan, Edward H. Egelman, and Vincent P. Conticello

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Development and evaluation of a deep neural network for histologic classification of renal cell carcinoma on biopsy and surgical resection slides, Mengdan Zhu, Bing Ren, Ryland Richards, Matthew Suriawinata, Naofumi Tomita, and Saeed Hassanpour

Submissions from 2020

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Automatic Recognition, Segmentation, and Sex Assignment of Nocturnal Asthmatic Coughs and Cough Epochs in Smartphone Audio Recordings: Observational Field Study, Filipe Barata, Peter Tinschert, Frank Rassouli, Claudia Steurer-Stey, Elgar Fleisch, Milo Puhan, Martin Brutsche, David Kotz, and Tobias Kowatsch

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Opportunities to Improve a Mobile Obesity Wellness Intervention for Rural Older Adults with Obesity, John A. Batsis, Stephen J. Bartels, Rachel Dokko, Alexandra Zagaria, John Naslund, Elizabeth Carpenter-Song, and David Kotz

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Barriers and facilitators in implementing a pilot, pragmatic, telemedicine-delivered healthy lifestyle program for obesity management in a rural, academic obesity clinic, John A. Batsis, Auden C. McClure, Aaron B. Weintraub, Diane Sette, Sivan Rotenberg, Courtney J. Stevens, Diane Gilbert-Diamond, David Kotz, Stephen Bartels, Summer B. Cook, and Richard I. Rothstein

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Measuring children’s eating behavior with a wearable device, Shengjie Bi, Yiyang Lu, Nicole Tobias, Ella Ryan, Travis Masterson, Sougata Sen, Ryan Halter, Diane Gilbert-Diamond, and David Kotz

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Workshop on the Development and Evaluation of Digital Therapeutics for Health Behavior Change: Science, Methods, and Projects, Alan J. Budney, Lisa A. Marsch, Will M. Aklin, Jacob T. Borodovsky, Mary F. Brunette, Andrew T. Campbell, Jesse Dallery, David Kotz, Ashley A. Knapp, Sarah E. Lord, Edward V. Nunes, Emily A. Scherer, Catherine Stanger, and William C. Torrey

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Automatic Learning coupled with Interpretability: MBDA in Action, José Camacho, Rasmus Bro, and David Kotz

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Longitudinal analysis of a campus Wi-Fi network, José Camacho, Chris McDonald, Ron Peterson, Xia Zhou, and David Kotz

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Which Components of a Smartphone Walking App Help Users to Reach Personalized Step Goals? Results From an Optimization Trial, Jan-Niklas Kramer, Florian Künzler, Varun Mishra, Shawna Smith, David Kotz, Urte Scholz, Elgar Fleisch, and Tobias Kowatsch

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Securely Connecting Wearables to Ambient Displays with User Intent, Xiaohui Liang, Ronald Peterson, and David Kotz

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The application of digital health to the assessment and treatment of substance use disorders: The past, current, and future role of the National Drug Abuse Treatment Clinical Trials Network, Lisa A. Marsch, Aimee Campbell, Cynthia Campbell, Ching-Hua Chen, Emre Ertin, Udi Ghitza, Chantal Lambert-Harris, Saeed Hassanpour, August F. Holtyn, Yih-Ing Hser, Petra Jacobs, Jeffrey D. Klausner, Shea Lemley, David Kotz, Andrea Meier, Bethany McLeman, Jennifer McNeely, Varun Mishra, Larissa Mooney, Edward Nunes, Chrysovalantis Stafylis, Catherine Stanger, Elizabeth Saunders, Geetha Subramaniam, and Sean Young

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Continuous Detection of Physiological Stress with Commodity Hardware, Varun Mishra, Gunnar Pope, Sarah Lord, Stephanie Lewia, Byron Lowens, Kelly Caine, Sougata Sen, Ryan Halter, and David Kotz

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Evaluating the Reproducibility of Physiological Stress Detection Models, Varun Mishra, Sougata Sen, Grace Chen, Tian Hao, Jeffrey Rogers, Ching-Hua Chen, and David Kotz

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Using Natural Language Processing and Sentiment Analysis to Augment Traditional User-Centered Design: Development and Usability Study, Curtis L. Petersen, Ryan Halter, David Kotz, Lorie Loeb, Summer B. Cook, Dawna M. Pidgeon, Brock Christensen, and John A. Batsis

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Apparatus for Securely Configuring A Target Device and Associated Methods, Timothy J. Pierson, Xiaohui Liang, Ronald Peterson, and David Kotz

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Willingness to pay for a telemedicine-delivered healthy lifestyle programme, Vanessa K. Rauch, Meredith Roderka, Auden C. McClure, Aaron B. Weintraub, Kevin Curtis, David Kotz, Richard I. Rothstein, and John Batsis

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VibeRing: Using vibrations from a smart ring as an out-of-band channel for sharing secret keys, Sougata Sen and David Kotz

Submissions from 2019

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Development and Usability Assessment of a Connected Resistance Exercise Band Application for Strength-Monitoring, John A. Batsis, George G. Boateng, Lillian M. Seo, Curtis L. Petersen, Karen L. Fortuna, Emily V. Wechsler, Ronald J. Peterson, Summer B. Cook, Dawna Pidgeon, Rachel S. Dokko, Ryan J. Halter, and David F. Kotz

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Feasibility and acceptability of a rural, pragmatic, telemedicine‐ delivered healthy lifestyle programme, John A. Batsis, Auden C. McClure, Aaron B. Weintraub, David F. Kotz, Sivan Rotenberg, Summer B. Cook, Diane Gilbert-Diamond, Kevin Curtis, Courtney J. Stevens, Diane Sette, and Richard I. Rothstein

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Technology for Behavioral Change in Rural Older Adults with Obesity, John A. Batsis, John A. Naslund, Alexandra B. Zagaria, David Kotz, Rachel Dokko, Stephen J. Bartels, and Elizabeth Carpenter-Song

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Use of Amulet in behavioral change for geriatric obesity management, John A. Batsis, Alexandra B. Zagaria, Ryan J. Halter, George G. Boateng, Patrick Proctor, Stephen J. Bartels, and David Kotz

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Experience: Design, Development and Evaluation of a Wearable Device for mHealth Applications, George Boateng, Vivian Genaro Motti, Varun Mishra, John A. Batsis, Josiah Hester, and David Kotz

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Networkmetrics unraveled: MBDA in Action, José Camacho, Rasmus Bro, and David Kotz

Blockchain in Healthcare Data Systems: a Survey, Taylor Hardin and David Kotz

Amulet: an open-source wrist-worn platform for mHealth research and education, David Kotz

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Exploring the State-of-Receptivity for mHealth Interventions, Florian Künzler, Varun Mishra, Jan-Niklas Kramer, David Kotz, Elgar Fleisch, and Tobias Kowatsch

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Continuous Smartphone Authentication using Wristbands, Shrirang Mare, Reza Rawassizadeh, Ronald Peterson, and David Kotz

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CloseTalker: secure, short-range ad hoc wireless communication, Timothy J. Pierson, Travis Peters, Ronald Peterson, and David Kotz

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Proximity Detection with Single-Antenna IoT Devices, Timothy J. Pierson, Travis Peters, Ronald Peterson, and David Kotz

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Using vibrations from a SmartRing as an out-of-band channel for sharing secret keys, Sougata Sen, Varun Mishra, and David Kotz

Submissions from 2018

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PhasorSec: Protocol Security Filters for Wide Area Measurement Systems, Prashant Anantharaman, Kartik Palani, Rafael Brantley, Sergey Bratus, and Sean W. Smith

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Detecting Eating Episodes with an Ear-mounted Sensor, Shengjie Bi, Tao Wang, Nicole Tobias, Josephine Nordrum, Shang Wang, George Halvorsen, Sougata Sen, Ron Peterson, Kelly Caine, Kofi Odame, Ryan Halter, Jacob Sorber, and David Kotz

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Evaluating Prose Style Transfer with the Bible, Keith Carlson, Allen Riddell, and Daniel Rockmore

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The Accuracy, Fairness, and Limits of Predicting Recidivism, Julie Dressel and Hany Farid

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Indutivo: Contact-Based, Object-Driven Interactions with Inductive Sensing, Jun Gong, Xin Yang, Teddy Seyed, Josh Urban Davis, and Xing-Dong Yang

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Application Memory Isolation on Ultra-Low-Power Mcus, Taylor Hardin, Ryan Scott, Patrick Proctor, Josiah Hester, Jacob Sorber, and David Kotz

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Contact Prediction is Hardest for the Most Informative Contacts, but Improves with the Incorporation of Contact Potentials, Jack Holland, Qinxin Pan, and Gevorg Grigoryan

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Orecchio: Extending Body-Language through Actuated Static and Dynamic Auricular Postures, Da-Yuan Huang, Teddy Seyed, Jun Gong, Zhihao Yao, Yuchen Jiao, Xiang Anthony Chen, and Xing-Dong Yang

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Architecting a System Model for Personalized Healthcare Delivery and Managed Individual Health Outcomes, Inas S. Khayal and Amro M. Farid

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Workshop on Emerging Technology and Data Analytics for Behavioral Health, David Kotz, Sarah E. Lord, A. James O'Malley, Luke Stark, and Lisa Marsch

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Investigating Intervention Components and Exploring States of Receptivity for a Smartphone App to Promote Physical Activity: Study Protocol of the Ally Micro-Randomized Trial, Jan-Niklas Kramer, Florian Künzler, Varun Mishra, Bastien Presset, David Kotz, Shawna Smith, Urte Scholz, and Tobias Kowatsch

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Battery-Free Eye Tracker on Glasses, Tianxing Li and Xia Zhou

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Self-Powered Gesture Recognition with Ambient Light, Yichen Li, Tianxing Li, Ruchir Patel, Xia Zhou, and Xing-Dong Yang

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SAW: Wristband-Based Authentication for Desktop Computers, Shrirang Mare, Reza Rawassizadeh, Ronald Peterson, and David Kotz

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Detection and Monitoring of Repetitions Using an mHealth-Enabled Resistance Band, Curtis L. Peterson, Emily V. Wechsler, Ryan J. Halter, George G. Boateng, Patrick O. Proctor, David F. Kotz, Summer B. Cook, and John A. Batsis

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Nocloud: Experimenting with Network Disconnection by Design, Reza Rawassizadeh, Timothy Pierson, Ronald Peterson, and David Kotz

Submissions from 2017

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Sharing Annotated Audio Recordings of Clinic Visits With Patients-Development of the Open Recording Automated Logging System (ORALS): Study Protocol, Paul J. Barr, Michelle D. Dannenberg, Craig H. Ganoe, and William Haslett

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ActivityAware: an App for Real-Time Daily Activity Level Monitoring on the Amulet Wrist-Worn Device, George Boateng, Ryan Halter, John A. Batsis, and David Kotz

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Music of the 7Ts: Predicting and Decoding Multivoxel fMRI Responses with Acoustic, Schematic, and Categorical Music Features, Michael A. Casey

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Quantitative Criticism of Literary Relationships, Joseph P. Dexter, Theodore Katz, Nilesh Tripuraneni, Tathagata Dasgupta, Ajay Kannan, James Brofos, Jorge A. Bonilla Lopez, and Lea Schroeder

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LightTouch: Securely Connecting Wearables to Ambient Displays with User Intent, Xiaohui Liang, Tianlong Yun, Ronald Peterson, and David Kotz

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Toward Accurate and Efficient Feature Selection for Speaker Recognition on Wearables, Rui Liu, Reza Rawassizadeh, and David Kotz

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SPICE: Secure Proximity-Based Infrastructure for Close Encounters, Aarathi Prasad, Xiaohui Liang, and David Kotz

Submissions from 2016

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Polyfunctional Hiv-Specific Antibody Responses Are Associated with Spontaneous Hiv Control, Margaret E. Ackerman, Anastassia Mikhailova, Eric P. Brown, Karen G. Dowell, Bruce D. Walker, Chris Bailey-Kellogg, Todd J. Suscovich, and Galit Alter

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Mobile sensing and social computing, Javier Bajo, Andrew T. Campbell, Sigeru Omatu, Andre C. P. L. F. Carvalho, and Juan M. Corchado

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A New Method for Ecoacoustics? Toward the Extraction and Evaluation of Ecologically-Meaningful Soundscape Components Using Sparse Coding Methods, Alice Eldridge, Michael Casey, Paola Moscoso, and Mika Peck

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Amulet: An Energy-Efficient, Multi-Application Wearable Platform, Josiah Hester, Travis Peters, Tianlong Yun, Ronald Peterson, Joseph Skinner, Bhargav Golla, Kevin Storer, Steven Hearndon, Kevin Freeman, Sarah Lord, Ryan Halter, David Kotz, and Jacob Sorber

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The Amulet Wearable Platform: Demo Abstract, Josiah Hester, Travis Peters, Tianlong Yun, Ronald Peterson, Joseph Skinner, Bhargav Golla, Kevin Storer, Steven Hearndon, Sarah Lord, Ryan Halter, David Kotz, and Jacob Sorber

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Protein-Directed Self-Assembly of a Fullerene Crystal, Kook-Han Kim, Dong-Kyun Ko, Yong-Tae Kim, Nam Hyeong Kim, Jaydeep Paul, Shao-Qing Zhang, Christopher B. Murray, Rudresh Acharya, William F. DeGrado, Yong Ho Kim, and Gevorg Grigoryan

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Privacy and Security in Mobile Health – a Research Agenda, David Kotz, Carl A. Gunter, Santosh Kumar, and Jonathan P. Weiner

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Tertiary Alphabet for the Observable Protein Structural Universe, Craig\ O. Mackenzie, Jianfu Zhou, and Gevorg Grigoryan

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A Unifying Framework in Vector-valued Reproducing Kernel Hilbert Spaces for Manifold Regularization and Co-Regularized Multi-view Learning, Hà Quang Minh, Loris Bazzani, and Vittorio Murino

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Demo: Wanda, Securely Introducing Mobile Devices, Timothy J. Pierson, Xiaohui Liang, Ronald Peterson, and David Kotz

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Horizontal Gene Acquisitions, Mobile Element Proliferation, and Genome Decay in the Host-Restricted Plant Pathogen Erwinia Tracheiphila, Lori R. Shapiro, Erin D. Scully, Timothy J. Straub, Jihye Park, Andrew G. Stephenson, Gwyn A. Beattie, Mark L. Gleason, Roberto Kolter, Miguel C. Coelho, Consuelo M. De Moraes, Mark C. Mescher, and Olga Zhaxybayeva

Submissions from 2015

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Structure-Based Redesign of Lysostaphin Yields Potent Antistaphylococcal Enzymes that Evade Immune Cell Surveillance, Kristina Blazanovic, Hongliang Zhao, Yoonjoo Choi, Wen Li, Regina S. Salvat, Daniel C. Osipovitch, Jennifer Fields, Leonard Moise, Brent L. Berwin, Steven N. Fiering, Chris Bailey-Kellogg, and Karl E. Griswold

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Machine Learning Methods Enable Predictive Modeling of Antibody Feature:Function Relationships in RV144 Vaccinees, Ickwon Choi, Amy W. Chung, Todd J. Suscovich, Supachai Rerks-Ngarm, Punnee Pitisuttithum, Sorachai Nitayapha, Jaranit Kaewkungwal, Robert J. O'Connell, Donald Francis, Merlin L. Robb, Nelson L. Michael, Jerome H. Kim, Galit Alter, Margaret E. Ackerman, and Chris Bailey-Kellogg

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TRiP: Tracking Rhythms in Plants, an Automated Leaf Movement Analysis Program for Circadian Period Estimation, Kathleen Greenham, Ping Lou, Sara E. Remsen, Hany Farid, and C Robertson McClung

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Development and Validation of an Epitope Prediction Tool for Swine (Pigmatrix) Based on the Pocket Profile Method, Andres H. Gutiérrez, William D. Martin, Chris Bailey-Kellogg, Frances Terry, Leonard Moise, and Anee S. De Groot