DNA METHYLATION-BASED EPIGENETIC BIOMARKERS IN CELL-TYPE DECONVOLUTION AND TUMOR TISSUE OF ORIGIN IDENTIFICATION, Ze Zhang
Dartmouth College Ph.D Dissertations

Tracing Evolution of Gene Transfer Agents Using Comparative Genomics, Roman Kogay
Dartmouth College Ph.D Dissertations

GENOME-SCALE METHYLATION ANALYSIS IN BLOOD AND TUMOR IDENTIFIES IMMUNE PROFILE, AGE ACCELERATION, AND DNA METHYLATION ALTERATIONS ASSOCIATED WITH BLADDER CANCER OUTCOMES, Ji-Qing Chen
Dartmouth College Ph.D Dissertations

A Novel Multi-Network Approach Reveals Tissue-Specific Cellular Modulators of Fibrosis in Systemic Sclerosis, Jaclyn N. Taroni, Casey S. Greene, Viktor Martyanov, Tammara A. Wood
Dartmouth Scholarship

Familial Lung Cancer: A Brief History from the Earliest Work to the Most Recent Studies, Anthony Musolf, Claire Simpson, Mariza de Andrade, Diptasri Mandal, Colette Gaba, Ping Yang, Yafang Li
Dartmouth Scholarship

Application of RNAi-Induced Gene Expression Profiles for Prognostic Prediction in Breast Cancer, Yue Wang, Kenneth . M. K. Mark, Matthew H. Ung, Arminja Kettenbach, Todd Miller, Wei Xu, Wenqing Cheng Cheng, Tian Xia, Chao Cheng
Dartmouth Scholarship

Genomic analysis reveals hidden biodiversity within colugos, the sister group to primates, Victor C. Mason, Gang Li, Patrick Minx, Juergen Schmitz, Gennady Churakov, Liliya Doronina, Amanda D. Melin, Nathaniel J. Dominy
Dartmouth Scholarship

Integrative analysis of cancer genes in a functional interactome, Matthew H. Ung, Chun-Chi Liu, Chao Cheng
Dartmouth Scholarship

A general statistic framework for genome-based disease risk prediction, M Xiong, L Ma, N Lin, C Amos
Dartmouth Scholarship

A Comprehensive Benchmarking Study of Protocols and Sequencing Platforms for 16s Rrna Community Profiling, Rosalinda D’Amore, Umer Zeeshan Ijaz, Melanie Schirmer, John G. Kenny, Richard Gregory, Alistair C. Darby, Migun Shakya
Dartmouth Scholarship

Leveraging Global Gene Expression Patterns to Predict Expression of Unmeasured Genes, James Rudd, René A. Zelaya, Eugene Demidenko, Ellen L. Goode, Casey S. Greene S. Greene, Jennifer A. Doherty
Dartmouth Scholarship

Integrative Analysis of Survival-Associated Gene Sets in Breast Cancer, Frederick S. Varn, Matthew H. Ung, Shao Ke Lou, Chao Cheng
Dartmouth Scholarship

Methylation of Leukocyte DNA and Ovarian Cancer: Relationships with Disease Status and Outcome, Brooke L. Fridley, Sebastian M. Armasu, Mine S. Cicek, Melissa C. Larson, Chen Wang, Stacey J. Winham, Kimberly R. Kalli, Devin C. Koestler
Dartmouth Scholarship

How to Get the Most from Microarray Data: Advice from Reverse Genomics, Ivan P. Gorlov, Ji-Yeon Yang, Jinyoung Byun, Christopher Logothetis, Olga Y. Gorlova, Kim-Anh Do, Christopher Amos
Dartmouth Scholarship

REACTIN: Regulatory Activity Inference of Transcription Factors Underlying Human Diseases with Application to Breast Cancer, Mingzhu Zhu, Chun-Chi Liu, Chao Cheng
Dartmouth Scholarship

Machine Learning and Genome Annotation: A Match Meant to Be?, Kevin Y. Yip, Chao Cheng, Mark Gerstein
Dartmouth Scholarship

MicroRNAs and the Advent of Vertebrate Morphological Complexity, Alysha M. Heimberg, Lorenzo F. Sempere, Vanessa N. Moy, Phillip C. J. Donoghue, Kevin J. Peterson
Dartmouth Scholarship

Gene Response Profiles for Daphnia Pulex Exposed to the Environmental Stressor Cadmium Reveals Novel Crustacean Metallothioneins, Joseph R. Shaw, John K. Colbourne, Jennifer C. Davey, Stephen P. Glaholt, Thomas H. Hampton, Celia Y. Chen, Carol L. Folt, Joshua W. Hamilton
Dartmouth Scholarship

Sampling Daphnia's Expressed Genes: Preservation, Expansion and Invention of Crustacean Genes with Reference to Insect Genomes, John K. Colbourne, Brian D. Eads, Joseph Shaw, Elizabeth Bohuski, Darren Bauer, Justen Andrews
Dartmouth Scholarship

Characterization of the Yeast Ionome: A Genome-Wide Analysis of Nutrient Mineral and Trace Element Homeostasis in Saccharomyces Cerevisiae, David J. Eide, Suzanne Clark, T . Murlidharan Nair, Mathias Gehl, Michael Gribskov, Mary Lou Guerinot, Jeffrey Harper
Dartmouth Scholarship

A Gene Expression Fingerprint of C. Elegans Embryonic Motor Neurons, Rebecca M. Fox, Stephen E. Von Stetina, Susan J. Barlow, Christian Shaffer, Kellen L. Olszewski, Jason H. Moore
Dartmouth Scholarship

Chemical Genomics in Yeast, Charles Brenner
Dartmouth Scholarship