This collection contains works by faculty from the Dartmouth Department of Biological Sciences.

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Submissions from 2007

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Stoichiometric Controls of Mercury Dilution by Growth, Roxanne Karimi, Celia Y. Chen, Paul C. Pickhardt, Nicholas S. Fisher, and Carol L. Folt

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In Vivo Construction of Recombinant Molecules within the Caenorhabditis Elegans Germ Line Using Short Regions of Terminal Homology, Benedict J. Kemp, Julia Hatzold, Laura A. Sternick, Joshua Cornman-Homonoff, Jessica M. Whitaker, Pamela J. Tieu, and Eric J. Lambie

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Regulation of Meiotic Cohesion and Chromosome Core Morphogenesis during Pachytene in Drosophila Oocytes, Radhika S. Khetani and Sharon E. Bickel

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A Strong Constitutive Ethylene-Response Phenotype Conferred on Arabidopsis Plants Containing Null Mutations in the Ethylene Receptors ETR1 and ERS1, Xiang Qu, Brenda P. Hall, Zhiyong Gao, and G. Eric Schaller

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Gene Response Profiles for Daphnia Pulex Exposed to the Environmental Stressor Cadmium Reveals Novel Crustacean Metallothioneins, Joseph R. Shaw, John K. Colbourne, Jennifer C. Davey, Stephen P. Glaholt, Thomas H. Hampton, Celia Y. Chen, Carol L. Folt, and Joshua W. Hamilton

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Impact of Minimum Winter Temperatures on the Population Dynamics of Dendroctonus Frontalis, J. Khải Trần, Tiina Ylioja, Ronald F. Billings, Jacques Régnière, and Matthew P. Ayres

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Parasites Alter Community Structure, Chelsea L. Wood, James E. Byers, Kathryn L. Cottingham, and Irit Altman

Submissions from 2006

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Bounded Search for de Novo Identification of Degenerate Cis-Regulatory Elements, Jonathan M. Carlson, Arijit Chakravarty, Radhika S. Khetani, and Robert H. Gross

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RAB-10 is Required for Endocytic Recycling in the Caenorhabditis elegans Intestine, Carlos Chih-Hsiung Chen, Peter J. Schweinsberg, Shilpa Vashist, Darren P. Mareiniss, Eric J. Lambie, and Barth D. Grant

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Viral Ecology and the Maintenance of Novel Host Use, John Dennehy, Nicholas Friedenberg, Robert Holt, and Paul Turner

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Bacteriophage Migration via Nematode Vectors: Host-Parasite-Consumer Interactions in Laboratory Microcosms, John J. Dennehy, Nicholas A. Friedenberg, Yul W. Yang, and Paul E. Turner

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From Mendel to Molecules: A Brief History of Evolutionary Genetics, Michael Dietrich

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Moments of Truth in Genetic Medicine, Michael Dietrich

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Outsiders as Innovators in the Life Sciences, Michael Dietrich

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Three Perspectives on Neutrality and Drift in Molecular Evolution, Michael Dietrich

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Integration without unification: an argument for pluralism in the biological sciences, Michael Dietrich and Sandra D. Mitchell

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A Kinesin-Like Calmodulin-Binding Protein in Chlamydomonas: Evidence for a Role in Cell Division and Flagellar Functions, Erin E. Dymek, Daniel Goduti, Tal Kramer, and Elizabeth F. Smith

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Evaluating the Long-Term Metacommunity Dynamics of Tree Hole Mosquitoes, Alicia M. Ellis, L. Philip Lounibos, and Marcel Holyoak

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AgSwe1p Regulates Mitosis in Response to Morphogenesis and Nutrients in Multinucleated Ashbya gossypii Cells, Hanspeter Helfer and Amy S. Gladfelter

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Limited Functional Redundancy and Oscillation of Cyclins in Multinucleated Ashbya Gossypii Fungal Cells, A. Katrin Hungerbuehler, Peter Philippsen, and Amy S. Gladfelter

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Coexistence of the Niche and Neutral Perspectives in Community Ecology, Mathew A. Leibold and Mark A. McPeek

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Linking Direct and Indirect Data on Dispersal: Isolation by Slope in a Headwater Stream Salamander, Winsor H. Lowe, Gene E. Likens, Mark A. McPeek, and Don C. Buso

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Enzyme–microbe Synergy During Cellulose Hydrolysis by Clostridium Thermocellum, Yanpin Lu, Yi-Heng P. Zhang, and Lee R. Lynd

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Integration without Unification: An Argument for Pluralism in the Biological Sciences, Sandra D. Mitchell and Michael R. Dietrich

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An Essential Role for Endocytosis of Rhodopsin through Interaction of Visual Arrestin with the AP-2 Adaptor, Nicholas R. Orem, Luxi Xia, and Patrick J. Dolph

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A Subset of Arabidopsis AP2 Transcription Factors Mediates Cytokinin Responses in Concert with a Two-Component Pathway, Aaron M. Rashotte, Michael G. Mason, Claire E. Hutchison, Fernando J. Ferreira, G. Eric Schaller, and Joseph J. Kieber

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Genetic and Maternal Determinants of Effective Dispersal: The Effect of Sire Genotype and Size at Birth in Side-Blotched Lizards, Barry Sinervo, Ryan Calsbeek, Tosha Comendant, and Christiaan Both

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Time Constraints Mediate Predator-Induced Plasticity in Immune Function, Condition, and Life History, Robby Stoks, Marjan De Block, Stefanie Slos, Wendy Van Doorslaer, and Jens Rolff

Submissions from 2005

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Ecological Costs and Benefits of Defenses in Nectar, Lynn S. Adler and Rebecca E. Irwin

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Integrated Recombinant Protein Expression and Purification Platform Based on Ralstonia eutropha, Gavin C. Barnard, Jesse D. McCool, David W. Wood, and Tillman U. Gerngross

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Knowing When to Draw the Line: Designing More Informative Ecological Experiments, Kathryn L. Cottingham, Jay T. Lennon, and Bryan L. Brown

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Discovering Cell Mechanisms: The Creation of Modern Cell Biology, Michael Dietrich

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Two Men Who Invented Genetics, Michael Dietrich

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Writing the Future: Progress and Evolution, Michael Dietrich

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Characterization of the Yeast Ionome: A Genome-Wide Analysis of Nutrient Mineral and Trace Element Homeostasis in Saccharomyces Cerevisiae, David J. Eide, Suzanne Clark, T . Murlidharan Nair, Mathias Gehl, Michael Gribskov, Mary Lou Guerinot, and Jeffrey Harper

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Susceptibility of Biofilms to Bdellovibrio Bacteriovorus Attack, Daniel Kadouri and George A. O'Toole

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A Three-Component Regulatory System Regulates Biofilm Maturation and Type III Secretion in Pseudomonas aeruginosa, Sherry l. Kuchma, John P. Connolly, and George A. O'Toole

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Origin of the Eumetazoa: Testing Ecological Predictions of Molecular Clocks against the Proterozoic Fossil Record, Kevin J. Peterson and Nicholas J. Butterfield

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Role of Spontaneous Current Oscillations during High-Efficiency Electrotransformation of Thermophilic Anaerobes, Michael V. Tyurin, Charles R. Sullivan, and Lee R. Lynd

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Calmodulin and PF6 are components of a complex that localizes to the C1 microtubule of the flagellar central apparatus, Matthew J. Wargo, Erin E. Dymek, and Elizabeth F. Smith

Submissions from 2004

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A Dominant-Negative fur Mutation in Bradyrhizobium japonicum, Heather P. Benson, Kristin LeVier, and Mary Lou Guerinot

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Isolation and Characterization of a Generalized Transducing Phage for Pseudomonas aeruginosa Strains PAO1 and PA14, Jonathan M. Budzik, William A. Rosche, Arne Rietsch, and George A. O'Toole

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SadB Is Required for the Transition from Reversible to Irreversible Attachment during Biofilm Formation by Pseudomonas aeruginosa PA14, Nicky C. Caiazza and George A. O'Toole

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Genesis: The Evolution of Biology, Michael Dietrich

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Mendel's Legacy: The Origin of Classical Genetics, Michael Dietrich

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Shaping Science with Rhetoric: The Cases of Dobzhansky, Schrdinger, and Wilson, Michael Dietrich

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Drosophila RNase Z Processes Mitochondrial and Nuclear Pre-Trna 3′ Ends In Vivo, Edward B. Dubrovsky, Veronica A. Dubrovskaya, Louis Levinger, Steffen Schiffer, and Anita Marchfelder

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PF15p Is the Chlamydomonas Homologue of the Katanin p80 Subunit and Is Required for Assembly of Flagellar Central Microtubules, Erin E. Dymek, Paul A. Lefebvre, and Elizabeth F. Smith

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Phylogenetic Analysis of the Formin Homology 2 Domain, Henry N. Higgs and Kevin J. Peterson

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Stage-Specific and Interactive Effects of Sedimentation and Trout on a Headwater Stream Salamander, Winsor H. Lowe, Keith H. Nislow, and Douglas T. Bolger

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Estimating metazoan divergence times with a molecular clock, Kevin J. Peterson, Jessica B. Lyons, Kristin S. Nowak, Carter M. Takacs, Matthew J. Wargo, and Mark A. McPeek

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The Tumor Suppressor LKB1 Kinase Directly Activates AMP-Activated Kinase and Regulates Apoptosis in Response to Energy Stress, Reuben J. Shaw, Monica Kosmatka, Nabeel Bardeesy, Rebecca L. Hurley, Lee A. Witters, Ronald A. DePinho, and Lewis C. Cantley

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Electrotransformation of Clostridium thermocellum, Michael V. Tyurin, Sunil G. Desai, and Lee R. Lynd

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Analysis of Microtubule Sliding Patterns in Chlamydomonas Flagellar Axonemes Reveals Dynein Activity on Specific Doublet Microtubules, M. J. Wargo, Mark A. McPeek, and Elizabeth F. Smith

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The Cohesion Protein ORD is Required for Homologue Bias During Meiotic Recombination, Hayley A. Webber, Louisa Howard, and Sharon E. Bickel

Submissions from 2003

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Richard Goldschmidt: hopeful monsters and other 'heresies', Michael Dietrich

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The Delphic Boat: What Genomes Tell Us, Michael Dietrich

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Estimating Community Stability and Ecological Interactions from Time-Series Data, A. R. Ives, B. Dennis, K. L. Cottingham, and S. R. Carpenter

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Linking Dispersal to Local Population Dynamics: A Case Study Using a Headwater Salamander System, Winsor H. Lowe

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Enhancer Trapping Reveals Widespread Circadian Clock Transcriptional Control in Arabidopsis, Todd P. Michael and C Robertson McClung

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Two Arabidopsis Circadian Oscillators Can be Distinguished by Differential Temperature Sensitivity, Todd P. Michael, Patrice A. Salome, and C. Robertson McClung

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Antipredator Behavior and Physiology Determine Lestes Species Turnover Along the Pond-Permanence Gradient, Robby Stoks and Mark A. McPeek

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Predators and Life Histories Shape Lestes Damselfly Assemblages Along a Freshwater Habitat Gradient, Robby Stoks and Mark A. McPeek

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Asymmetry of the Central Apparatus Defines the Location of Active Microtubule Sliding in Chlamydomonas Flagella, Matthew J. Wargo and Elizabeth F. Smith

Submissions from 2002

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Meiotic Cohesion Requires Accumulation of ORD on Chromosomes before Condensation, Eric M. Balicky, Matthew W. Endres, Cary Lai, and Sharon E. Bickel

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Embryology in wax, Michael Dietrich

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Imaginal Discs: The Genetic and Cellular Logic of Pattern Formation, Michael Dietrich

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Algal Blooms Reduce the Uptake of Toxic Methylmercury in Freshwater Food Webs, Paul C. Pickhardt, Carol L. Folt, Celia Y. Chen, Bjoern Klaue, and Joel D. Blum

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Regulation of Flagellar Dynein by Calcium and a Role for an Axonemal Calmodulin and Calmodulin-dependent Kinase, Elizabeth F. Smith

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Predators and Life Histories Shape Lestes Damselfly Assemblages Along a Freshwater Habitat Gradient, Robby Stoks and Mark A. McPeek

Submissions from 2001

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Trophic Cascades, Nutrients, and Lake Productivity: Whole-Lake Experiments, Stephen R. Carpenter, Jonathan J. Cole, James R. Hodgson, James F. Kitchell, Michael L. Pace, Darren Bade, and Kathryn L. Cottingham

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The Mannose-Sensitive Hemagglutinin of Vibrio cholerae Promotes Adherence to Zooplankton, Deborah A. Chiavelli, Jane W. Marsh, and Ronald K. Taylor

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Genes, Categories, and Species: The Evolutionary and Cognitive Causes of the Species Problem, Michael Dietrich

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Networking Senescence-Regulating Pathways by Using Arabidopsis Enhancer Trap Lines, Yuehui He, Weining Tang, Johnnie D. Swain, Anthony L. Green, Thomas P. Jack, and Susheng Gan

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Interactions Among Environmental Drivers: Community Responses to Changing Nutrients and Dissolved Organic Carbon, Jennifer L. Klug and Kathryn L. Cottingham

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Phylogenetic Relationships within Cation Transporter Families of Arabidopsis, Pascal Mäser, Sébastien Thomine, Julian I. Schroeder, John M. Ward, Kendal Hirschi, Heven Sze, Ina N. Talke, Anna Amtmann, Frans J.M. Maathuis, Dale Sanders, Jeff F. Harper, Jason Tchieu, Michael Gribskov, Michael W. Persans, David E. Salt, Sun A. Kim, and Mary Lou Guerinot

Submissions from 2000

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Nitrogen Budgets of Phloem-Feeding Bark Beetles with and without Symbiotic Fungi, Matthew P. Ayres, Richard T. Wilkens, Jonathan J. Ruel, María J. Lombardero, and Erich Vallery

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An American Obsession: Science, Medicine, and Homosexuality in Modern Society, Michael Dietrich

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From Gene to Genetic Hierarchy: Richard Goldschmidt and the Problem of the Gene, Michael Dietrich

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From hopeful monsters to homeotic effects: Richard Goldschmidt's integration of development, evolution, and genetics, Michael Dietrich

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Of moths and men: Theo Lang and the persistence of Richard Goldschmidt's theory of homosexuality, 1916-1960, Michael Dietrich

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The problem of the gene, Michael Dietrich

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Unifying Biology: Evolutionary and Molecular Biology: Science Perspectives on Divine Action, Michael Dietrich

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Richard Goldschmidt and the Crossing-Over Controversy, Michael Dietrich and Marsha Richmond

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Consequences of Dominance-Mediated Habitat Segregation in American Redstarts During the Nonbreeding Season, Peter P. Marra and Richard T. Holmes

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Integrated Temporal Regulation of the Photorespiratory Pathway. Circadian Regulation of Two Arabidopsis Genes Encoding Serine Hydroxymethyltransferase, C Robertson McClung, Meier Hsu, Janet E. Painter, Jennifer M. Gagne, Sharon D. Karlsberg, and Patrice A. Salome

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The Risks and Benefits of Genetically Modified Crops: A Multidisciplinary Perspective, Garry D. Peterson, Saul Cunningham, Lisa Deutsch, Jon Erickson, Allyson Quinlan, Ernesto Ráez-Luna, Robert Tinch, Max Troell, Peter Woodbury, and Scot Zens

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Fast Transport of Neurofilament Protein along Microtubules in Squid Axoplasm, Veena Prahlad, Brian T. Helfand, George M. Langford, Ron D. Vale, and Robert D. Goldman

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An Enhancer Trap Line Associated with a D-Class Cyclin Gene in Arabidopsis, Kankshita Swaminathan, Yingzhen Yang, Natasha Grotz, Lauren Campisi, and Thomas Jack

Submissions from 1999

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A Role for the Light-Dependent Phosphorylation of Visual Arrestin, Paul G. Alloway and Patrick J. Dolph

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Cell Cycle-Dependent Sequencing of Cell Fate Decisions in Caenorhabditis Elegans Vulva Precursor Cells, Victor Ambros

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Structure and Function Analysis of LIN-14, a Temporal Regulator of Postembryonic Developmental Events in Caenorhabditis elegans, Yang Hong, Rosalind C. Lee, and Victor Ambros

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Succinate Dehydrogenase (Sdh) from Bradyrhizobium japonicum Is Closely Related to Mitochondrial Sdh, David J. Westenberg and Mary Lou Guerinot

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Host-Driven Population Dynamics in an Herbivorous Insect, Tiina Ylioja, Heikki Roininen, Matthew P. Ayres, Matti Rousi, and Peter W. Price

Submissions from 1998

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Gregor Mendel: The First Geneticist, Michael Dietrich

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Unifying Biology: The Evolutionary Synthesis and Evolutionary Biology, Michael Dietrich

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Identification of a Family of Zinc Transporter Genes from Arabidopsis that Respond to Zinc Deficiency, Natasha Grotz, Tama Fox, Erin Connolly, Walter Park, Mary Lou Guerinot, and David Eide

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Thermodynamic Constraints on Nitrogen Transformations and Other Biogeochemical Processes at Soil-Stream Interfaces, Lars O. Hedin, Joseph C. von Fischer, Nathaniel E. Ostrom, Brian P. Kennedy, Michael G. Brown, and G. Philip Robertson

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Developmental Regulation of a Cyclin-Dependent Kinase Inhibitor Controls Postembryonic Cell Cycle Progression in Caenorhabditis Elegans, Yang Hong, Richard Roy, and Victor Ambros

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The Consequences of Changing the Top Predator in a Food Web: A Comparative Experimental Approach, Mark A. McPeek